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Job DescriptionP0AD96
Confidence41.61%DateThu Jan 5 11:20:22 GMT 2012
Rank177Aligned Residues241
% Identity12%Templatec3fkkA_
PDB info PDB header:lyaseChain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  DDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAA
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Template Sequence  TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDER. . . . . . DVLTRTILEHVAGRVPVIVTTSHYSTQVCAARS
Template Known Secondary structure  TSSB
TT
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SSGGGTGGGS
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   34.....40.........50.........60.........70.... .....80.........90.........100.......
 
   153......160.........170. ........180.........190.........200.........210.........220.......
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Query Sequence  KYILEKVKPQRIAIVHDKQ. . . . . QYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHP
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Template Sequence  LRAQQL. GAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQVAYFKIETP
Template Known Secondary structure  T.T
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ST
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   108.110... ......120.........130.........140.........150.........160.........170.........180......
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  EMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAAL
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Template Sequence  GAANKLRELIRLGGDAIEGPWDGEEAITLLADLHAGATGAMTGGGF. . . . . . . . PDGIRPILEAWREGRHDDAYARYQAW
Template Known Secondary structure  TGGG


GGGTTTT




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   187..190.........200.........210.........220.........230.. .......240.........250........
 
   308.310.........320........
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Query Sequence  QSLQAGLNQSDDPAEIAKYLK
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Template Sequence  LPLINHENRQSGILTAKALMR
Template Known Secondary structure  TTGGG
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   259260.........270.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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