Job Description P0AD96 Confidence 29.24% Date Thu Jan 5 11:20:22 GMT 2012 Rank 208 Aligned Residues 97 % Identity 16% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		R	I	A	I	V	H	D	K	Q	Q	Y	G	E	G	L	A	R	A	V	Q	D	G	L	K	K	G	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	.	.	H	P	E	M	G	Q	I	L	R	Q	A	R	A	A	G
Query Conservation																																																																	.	.
Alig confidence										.	.	.	.																								.	.	.	.	.	.																							.	.
Template Conservation										.	.	.	.																								.	.	.	.	.	.
Template Sequence		N	A	I	I	I	D	D	H	.	.	.	.	P	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	E	L	T	.	.	.	.	.	.	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R	K	R	Q
Template Known Secondary structure										.	.	.	.														T	T								S	.	.	.	.	.	.	S	S	T	T											S						T	T		S	S	S												T	T
Template Predicted Secondary structure										.	.	.	.																								.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	Q	F	M	G	P	E	G	V	A	N	V	S	L	S	N	I	A	G	E	S	A	E	G	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	G	I	I	I	I	V	S	A	K	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S
Template Known Secondary structure				S											S	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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