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Job DescriptionP0AD96
Confidence96.89%DateThu Jan 5 11:20:22 GMT 2012
Rank101Aligned Residues179
% Identity14%Templatec3e61A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative transcriptional repressor of ribose operon; PDBTitle: crystal structure of a putative transcriptional repressor of ribose2 operon from staphylococcus saprophyticus subsp. saprophyticus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  VAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQP
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Template Sequence  IGLLLP. . DMSNPFFTLIARGVEDVALA. . . . . . . HGYQV. . LIGNSDNDIKKAQGYLATFVSHNCTGMISTAFN. . . EN
Template Known Secondary structure  S..
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   62..... ..70.........80....... ..90.. .......100.........110.........120..... ..
 
   108.110.........120.........130.........140.........150.........160.........170.. .......180.....
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Query Sequence  ASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQ. . YGEGLARAVQDGL
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Template Sequence  IIENTLTDHIPFVFIDRI. . . . . . . . . . . . . . . . . . NHFKGGQLQAEVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYIL
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   128.130.........140..... ....150.........160.........170.........180.........
 
   186...190.........200.........210.........220.........230.........240....
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Query Sequence  KKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQ
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Template Sequence  DQDYK. . . . . . MLEATLLDNDKKFIDLIKELSIDSIICSNDLLAINVLGIVQRYHFKVP
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   200.... .....210.........220.........230.........240.........250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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