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Job DescriptionP0AD96
Confidence97.26%DateThu Jan 5 11:20:22 GMT 2012
Rank97Aligned Residues193
% Identity7%Templatec3cs3A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from enterococcus faecalis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  KVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQ
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Template Sequence  IIGVYLA. . DYGGSFYGELLEGIKKGLAL. . . . . . . FDYEMIVCSGKKSHL. . . . . . . . . FIPEKMVDGAIILDWTFP. T
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   61...... ..70.........80....... ..90.........100.. .......110.........120 .
 
   107..110.........120.........130.........140.........150.........160....... ..170.........180.....
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Query Sequence  PASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIV. HDKQQYGEGLARAVQDGL
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Template Sequence  KEIEKFAERGHSIVVLDRTTEH. . . . . . RNIRQVLLDNRGGATQAIEQFVNVGSKKVLLLSGPEKGYDSQERLAVSTREL
Template Known Secondary structure  TT
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   122.......130.........140... ......150.........160.........170.........180.........190.....
 
   186...190.........200.........210... ......220.........230.........240....
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Query Sequence  KKGNANVVFFDGITAGEKDFSTLVARLK. KENIDFVYYGGYHPEMGQILRQARAAGLKTQ
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Template Sequence  TRFGIPYEIIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFNDEMAIGVYKYVAETNYQMG
Template Known Secondary structure  TT



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   196...200.........210.........220.........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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