Job Description P0AD96 Confidence 98.30% Date Thu Jan 5 11:20:22 GMT 2012 Rank 71 Aligned Residues 198 % Identity 15% Template c3c3kA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of an uncharacterized protein from actinobacillus2 succinogenes Resolution 1.99 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	V	V	G	A	M	S	G	P	V	A	Q	Y	G	D	Q	E	F	T	G	A	E	Q	A	V	A	D	I	N	A	K	G	G	I	K	G	N	K	L	Q	I	V	K	Y	D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	V	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q
Query Conservation
Alig confidence									.	.																							.	.	.	.	.	.	.	.	.
Template Conservation									.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		M	L	L	V	M	V	S	.	.	N	I	A	N	P	F	C	A	A	V	V	K	G	I	E	K	T	A	E	K	N	G	.	.	.	.	.	.	.	.	.	Y	R	I	L	L	C	N	T	E	S	D	L	A	R	S	R	S	C	L	T	L	L	S	G	K	M	V	D	G	V	I	T	M	D	A	L	S	E	L	P
Template Known Secondary structure								S	.	.		T	T	S																	T	T	.	.	.	.	.	.	.	.	.									T	T									T					T	T			S								G	G	G
Template Predicted Secondary structure									.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		P	A	S	D	I	Y	E	D	E	G	I	L	M	I	T	P	A	A	T	A	P	E	L	T	A	R	G	Y	Q	L	I	L	R	T	T	G	L	D	S	D	Q	G	P	T	A	A	K	Y	I	L	E	K	V	K	P	Q	R	I	A	I	V	H	.	.	D	K	Q	Q	Y	G	E	G	L	A	R	A	V	Q	D	G
Query Conservation																																																																.	.
Alig confidence									.	.														.	.	.	.	.	.																									.										.	.
Template Conservation									.	.														.	.	.	.	.	.																									.
Template Sequence		E	L	Q	N	I	I	G	.	.	A	F	P	W	V	Q	C	A	E	Y	D	P	L	.	.	.	.	.	.	S	T	V	S	S	V	S	I	D	D	V	A	A	S	E	Y	V	V	D	Q	L	V	K	S	.	G	K	K	R	I	A	L	I	N	H	D	L	A	Y	Q	Y	A	Q	H	R	E	S	G	Y	L	N	R
Template Known Secondary structure								T	.	.	T	S	S					S	S			T	T	.	.	.	.	.	.	S	S	S																					T	.	T											T	T	S
Template Predicted Secondary structure									.	.														.	.	.	.	.	.																									.
Template SS confidence
		79	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	K	K	G	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	.	.	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	H	P	E	M	G	Q	I	L	R	Q	A	R	A	A	G	L	K	T	Q
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		L	K	F	H	G	L	D	Y	S	R	I	S	Y	A	E	N	L	D	Y	M	A	G	K	L	A	T	F	S	L	L	K	S	A	V	K	P	D	A	I	F	A	I	S	D	V	L	A	A	G	A	I	Q	A	L	T	E	S	G	L	S	I	P
Template Known Secondary structure						T										S	S	S	S													S	S	S	S			S					S	S														T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions