Job Description P0AD96 Confidence 22.79% Date Thu Jan 5 11:20:22 GMT 2012 Rank 224 Aligned Residues 137 % Identity 9% Template c2o1eB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583 Resolution 2.60 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	K	V	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	T	P	A	A	T	A	P	E	L	T	A	R	G	Y	Q	L	I	L	R	T	T	G	L	D	S	D	Q	G	P	T	A	A	K	Y	I	L	E	K	V	K	P	Q	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	N	I	Q	D	A	D	L	F	V	Y	N	S	E	Y	X	E	T	W	V	P	S	A	E	K	S	X	G	Q	G	H	A	V	F	V	N	A	S	K	G	I	D	L	X	E	G	A	X	D	P	H	V	W	L	S	P	V	L	A	Q	K	E	V	K	N	I	T	A	Q	I	V	K	Q	D	P	D	N	K	E
Template Known Secondary structure								S	S					S		T	T	T	S	T	T							T	T		S	S	S						T	T	T	T					B			B			G	G	G	G	S																				G	G	G
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		A	I	V	H	D	K	Q	Q	Y	G	E	G	L	A	R	A	V	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	K	G	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	.	.	.	.	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		Y	Y	E	K	N	S	K	E	Y	I	A	K	L	Q	D	L	D	K	L	Y	R	T	T	A	K	K	A	E	K	K	E	F	I	T	Q	H	T	A	F	G	Y	L	A	K	E	Y	G	L	K	Q	V	P	I	A	G	L	S	P	D	Q	E	P	S	A	A	S	L	A	K	L	K	T	Y	A	K	E	H	N	V	K
Template Known Secondary structure																													S	S						S	S										T	T							S	S			S	S	S												T					T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		219	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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