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Job DescriptionP77509
Confidence100.00%DateThu Jan 5 12:30:08 GMT 2012
Rank37Aligned Residues221
% Identity24%Templatec2yz2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20. ........30.........40.........50.........60.........70.........80.....
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Query Sequence  AKVVAGNKRYP. . . . . GVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRA
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Template Sequence  IEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERK. . . . . . . KGYE
Template Known Secondary structure  TTTSTT

TT

STT

TTSS

STT
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   3......10.........20.........30.........40.........50.........60.........70. ....
 
   86...90....... ..100.........110.........120.........130.........140.........150.........160....
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Query Sequence  AELGVRAVYQEL. SLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVM
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Template Sequence  IRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFV. . GLDFDSFKDRVPFFLSGGEKRRVAIASVI
Template Known Secondary structure  GGG
SSGGGG


SS
TTS
..T

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   76...80.........90.........100.........110.........120.... .....130.........140.........150...
 
   165....170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  KGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHH
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Template Sequence  VHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKY
Template Known Secondary structure  TT

SSTTTT

TT

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   154.....160.........170.........180.........190.........200.........210.........220.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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