Job Description P77509 Confidence 96.58% Date Thu Jan 5 12:30:08 GMT 2012 Rank 231 Aligned Residues 167 % Identity 15% Template c2iusB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain Resolution 2.7 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		D	N	V	N	F	T	L	N	K	G	E	V	R	A	L	L	G	K	N	G	A	G	K	S	T	L	I	R	M	L	T	G	.	.	S	E	R	P	D	S	G	D	I	W	I	G	E	T	R	L	E	G	D	E	A	T	L	T	R	R	A	A	E	L	G	V	R	A	V	Y	Q	E	L	S	L	V	E	G	L	T
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		E	P	V	V	A	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	A	S	V	G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	D	V	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	R
Template Known Secondary structure								G	G	G	S		S							T	T	S	S														T	T			T	T	T								T	T	S	S	S	S	G	G	G	T	T		T	T	B	S	S	S		B		S
Template Predicted Secondary structure
Template SS confidence
		975	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.
		105	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure											.	.																											.	.
Query SS confidence											.	.																											.	.
Query Sequence		V	A	E	N	L	C	L	G	Q	.	.	W	P	R	R	N	G	M	I	D	Y	L	Q	M	A	Q	D	A	Q	R	C	L	Q	A	L	G	V	.	.	D	V	S	P	E	Q	L	V	S	T	L	S	P	A	Q	K	Q	L	V	E	I	A	R	V	M	K	G	E	P	R	V	V	I	L	D	E	P	T	S	S	L
Query Conservation											.	.																											.	.
Alig confidence											.	.																											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		W	C	V	N	E	M	E	R	R	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	Y	N	E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	H	P	V	L	K	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	I	V	V	L	V	D	E	.	F	A	D	L
Template Known Secondary structure																	T	T		S	S														T	T				B		T	T				B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		1055	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.																	.	.	.	.	.	1110	.	.	.		.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		A	S	A	E	V	E	L	V	I	S	A	V	K	K	M	.	.	.	.	S	A	L	G	V	A	V	I	Y	V	S	H	R	M	E
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P	S
Template Known Secondary structure																								T								S
Template Predicted Secondary structure
Template SS confidence
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions