Job Description P77509 Confidence 100.00% Date Thu Jan 5 12:30:08 GMT 2012 Rank 57 Aligned Residues 202 % Identity 23% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	V	A	G	N	K	R	Y	P	G	V	V	A	L	D	N	V	N	F	T	L	N	K	G	E	V	R	A	L	L	G	K	N	G	A	G	K	S	T	L	I	R	M	L	T	G	S	E	R	P	D	S	G	D	I	W	I	G	E	T	R	L	E	G	D	E	A	T	L	T	R	R	A	A	E	L	G	V
Query Conservation
Alig confidence														.	.																																								.											.	.	.	.
Template Conservation														.	.																																								.											.	.	.	.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	.	.	.	.	N	K	Y	N	R	N	S	I	R	S	I	I
Template Known Secondary structure														.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	.	.	.	.	G	G	S							T	T
Template Predicted Secondary structure														.	.																																								.											.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		R	A	V	Y	Q	E	L	S	L	V	E	G	L	T	V	A	E	N	L	C	L	G	Q	W	P	R	R	N	G	M	I	D	Y	L	Q	M	A	Q	D	A	Q	R	C	L	Q	A	L	G	V	D	V	S	P	E	Q	.	.	.	.	.	L	V	S	T	L	S	P	A	Q	K	Q	L	V	E	I	A	R	V	M	K
Query Conservation																																																									.	.	.	.	.
Alig confidence														.										.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation														.										.	.	.	.	.	.	.	.	.
Template Sequence		G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	.	.	.	.	.	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L
Template Known Secondary structure						S	S					S	S	.	B							T	T	.	.	.	.	.	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure														.										.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	P	R	V	V	I	L	D	E	P	T	S	S	L	A	S	A	E	V	E	L	V	I	S	A	V	K	K	M	S	A	L	G	V	A	V	I	Y	V	S	H	R	M	E	E	I	R	R	I	A	S	C	A	T	V	M	R	D	G	Q	V	A	G	D	V	M	L	E	N	T	S	T	H	H
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N
Template Known Secondary structure		T			S												.	.	.	.	.	.	.	.	.	.																	S	S	G	G	G	S	.	T	T		S							T	T															T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions