Job Description P77509 Confidence 100.00% Date Thu Jan 5 12:30:08 GMT 2012 Rank 12 Aligned Residues 315 % Identity 25% Template c1oxtB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		V	P	V	A	K	V	V	A	G	N	K	R	Y	.	.	P	G	V	V	A	L	D	N	V	N	F	T	L	N	K	G	E	V	R	A	L	L	G	K	N	G	A	G	K	S	T	L	I	R	M	L	T	G	S	E	R	P	D	S	G	D	I	W	I	G	E	T	R	L	E	G	D	E	A	T	L	T	R	R	A
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		M	V	R	I	I	V	K	N	V	S	K	V	F	K	K	G	K	V	V	A	L	D	N	V	N	I	N	I	E	N	G	E	R	F	G	I	L	G	P	S	G	A	G	K	T	T	F	M	R	I	I	A	G	L	D	V	P	S	T	G	E	L	Y	F	D	D	R	L	V	A	S	N	G	K	L	I	V	P	P	E
Template Known Secondary structure															G	G	G	T													T	T									T	T	S	S										T	S	S			S							T	T						T	T			S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	G	V	R	A	V	Y	Q	E	L	S	L	V	E	G	L	T	V	A	E	N	L	C	L	G	Q	W	P	R	R	N	G	M	I	D	Y	L	Q	M	A	Q	D	A	Q	R	C	L	Q	A	L	G	V	D	V	S	P	E	Q	L	V	S	T	L	S	P	A	Q	K	Q	L	V	E	I	A	R	V	M	K
Query Conservation
Alig confidence					.																								.	.	.
Template Conservation					.																								.	.	.
Template Sequence		D	R	K	.	I	G	M	V	F	Q	T	W	A	L	Y	P	N	L	T	A	F	E	N	I	A	F	P	.	.	.	L	T	N	M	K	M	S	K	E	E	I	R	K	R	V	E	E	V	A	K	I	L	D	I	H	H	V	L	N	H	F	P	R	E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	V
Template Known Secondary structure		G	S		.						T	T					T	T	S								G	G	.	.	.	G	T	T	S	S																	T	T		G	G	G	T	T	S		G	G	G	S															T
Template Predicted Secondary structure					.																								.	.	.
Template SS confidence
		81	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		G	E	P	R	V	V	I	L	D	E	P	T	S	S	L	A	S	A	E	V	E	L	V	I	S	A	V	K	K	M	.	S	A	L	G	V	A	V	I	Y	V	S	H	R	M	E	E	I	R	R	I	A	S	C	A	T	V	M	R	D	G	Q	V	A	G	D	V	M	L	E	N	T	S	T	H	H	I	V	S	L
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		K	D	P	S	L	L	L	L	D	E	P	F	S	N	L	D	A	R	M	R	D	S	A	R	A	L	V	K	E	V	Q	S	R	L	G	V	T	L	L	V	V	S	H	D	P	A	D	I	F	A	I	A	D	R	V	G	V	L	V	K	G	K	L	V	Q	V	G	K	P	E	D	L	Y	D	N	P	V	S	I	Q
Template Known Secondary structure		T			S						S	S	S	S	S	S																												S										S							T	T														S		S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
																	245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	G	R	D	H	V	D	I	A	P	V	A	P	Q	E	I	V	D	Q	A	V	L	E	V	R	.	.	.	.	A	L	R	H	K	P	K	L	E	D	I	S	F	T	L	R	R	G	E	V	L	G	I	A	G	L	L	G	A	G	R	S	E	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		V	A	S	L	I	G	E	I	N	E	L	E	G	K	V	T	N	E	G	V	V	I	G	S	L	R	F	P	V	S	V	S	S	D	R	A	I	I	G	I	R	P	E	D	V	K	L	S	K	D	V	I	K	D	D	S	W	I	L	V	G	K	G	K	V	K	V	I	G	Y	Q	G	G	L	F	R	I	T	I	T
Template Known Secondary structure							S											S	S	S				T	T				S				S	S	S								G	G	G					S	S					T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		K	A	I	V	G	L	E	E	Y	E	Q	G	E	I	V	I	N	.	G	E	K	I
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		P	L	D	S	E	E	E	I	F	T	Y	S	D	H	P	I	H	S	G	E	E	V
Template Known Secondary structure			T	T										S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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