Job Description P23836 Confidence 33.95% Date Thu Jan 5 11:39:41 GMT 2012 Rank 407 Aligned Residues 103 % Identity 14% Template d2liva_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure										.	.	.																			.	.	.	.	.	.	.
Query SS confidence										.	.	.																			.	.	.	.	.	.	.
Query Sequence		V	L	V	V	E	D	N	A	.	.	.	L	L	R	H	H	L	K	V	Q	I	Q	D	A	G	H	Q	V	D	.	.	.	.	.	.	.	D	A	E	D	A	K	E	A	D	Y	Y	L	N	E	H	I	P	D	I	A	I	V	D	L	G	L	P	D	E	D	G	L	S	L	I	R	R	W	R	S	N	D	V	S
Query Conservation										.	.	.																			.	.	.	.	.	.	.
Alig confidence										.	.	.																			.	.	.	.	.	.	.																							.	.
Template Conservation																																																												.	.
Template Sequence		A	I	V	H	D	K	Q	Q	Y	G	E	G	L	A	R	A	V	Q	D	G	L	K	K	G	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D	F	V	Y	Y	.	.	G	G	Y	H	P	E	M	G	Q	I	L	R	Q	A	R	A	A	G	L	K
Template Known Secondary structure							S	S																T	T	T											T	T														T	T		S					.	.		S															T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	L	V	L	T	A	R	E	S	W	Q	D	K	V	E	V	L	S	A	G	A	D	D	Y	V	T	K	P	F	H	I	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	F	M	G	P	E	G	V	A	N	V	S	L	S	N	I	A	G	E	S	A	E	G	L	L	V	T	K	P	K	N	Y	D	Q
Template Known Secondary structure								G	G	G										G	G	G	G	T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions