 |
Job Description | P23836 | Confidence | 58.68% | Date | Thu Jan 5 11:39:41 GMT 2012 |
Rank | 267 | Aligned Residues | 53 |
% Identity | 17% | Template | d2g9wa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
Resolution | 1.80 |
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | I | K | L | T | A | F | E | Y | T | I | M | E | T | L | I | R | N | N | G | K | V | V | S | K | D | S | L | M | L | Q | L | Y | P | D | A | E | L | R | E | S | H | T | I | D | V | L | M | G | R | L | R | K | K |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   | . |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |   | . |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
Template Sequence |   |
K | L | T | R | L | G | D | L | E | R | A | V | X | D | H | L | W | S | . |
R | T | E | P | Q | T | V | R | Q | V | H | E | A | L | S | A | . |
R | R | D | L | A | Y | T | T | V | X | A | V | L | Q | R | L | A | K | K |
Template Known Secondary structure |   |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  | T | . |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T | . | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|