 |
Job Description | P23836 | Confidence | 51.29% | Date | Thu Jan 5 11:39:41 GMT 2012 |
Rank | 309 | Aligned Residues | 72 |
% Identity | 19% | Template | d2b2ca1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Spermidine synthase
|
Resolution | 2.50 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
. | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | L | V | V | E | D | N | A | L | L | R | H | H | L | K | V | Q | I | Q | D | A | G | H | . |
. |
. |
. |
. |
Q | V | D | . |
D | A | E | D | A | K | E | A | D | Y | Y | L | N | E | H | I | P | D | I | A | I | V | D | L | G | L | P | D | E | D | G | L | S | L | I | R | R | W | R | S | N | D | V | S | L | P | I |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . | . | . | . |   |
|   | . |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   | . |   |   |   |   |
|
|   |
|
|   |
|   | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |   |
|   |
|   |
|
|
Template Sequence |   |
K | V | T | M | C | E | I | D | E | M | V | I | D | V | A | K | K | F | L | P | G | M | S | C | G | F | S | H | P | K | L | D | L | F | C | G | D | G | F | E | F | L | K | N | . |
H | K | N | E | F | D | V | I | I | T | D | S | . |
. |
. |
. |
. |
. |
. |
. |
S | Y | Y | E | L | L | R | D | A | L | K | E | D | G | I |
Template Known Secondary structure |   |
 |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | T | S | G | G | G | G |
| T | T |  |  |  |  |
| S |
|  |  |  |  |  |  |  | . |
| T | T |
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
. | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
L | V | L | T | A | R | E |
Query Conservation |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
Template Sequence |   |
L | S | S | Q | G | E | S |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
218 | . | 220 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|