 |
Job Description | P23836 | Confidence | 23.41% | Date | Thu Jan 5 11:39:41 GMT 2012 |
Rank | 491 | Aligned Residues | 82 |
% Identity | 16% | Template | d1vm6a3 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.27 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | V | L | V | V | E | D | N | A | L | L | R | H | H | L | K | V | Q | I | Q | D | A | G | H | Q | V | D | D | A | E | D | A | K | E | A | D | Y | Y | L | N | E | H | I | P | D | I | A | I | V | D | L | G | L | P | D | E | D | G | L | S | L | I | R | R | W | R | S | N | D | V | S | L | P | I | L | V | L | T | A |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|
|
|
| . |
|
|
|   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   | . |
|   |   |
|
|
|
|
|
|
|
Template Sequence |   |
M | K | Y | G | I | V | G | Y | S | G | R | M | G | Q | E | I | Q | K | V | F | S | E | K | G | H | E | L | V | L | K | V | D | V | N | . |
. |
. |
G | V | E | E | L | D | S | P | D | V | V | I | . |
D | F | S | S | P | E | A | L | . |
P | K | T | V | D | L | C | K | K | Y | . |
R | A | G | L | V | L | G | T | T | A |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | T | T | . | . | . |  |  |  |  |
| S |
|
| S |  |  |  | . |  |
| S |
| G | G | G |  | . |  |  |  |  |  |  |  |  |  |  | . | T |
|  |  |  |  |
|
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |
|
|
|
|  |  |  | . |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | |
. | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | S | W | Q | D | K | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
Template Sequence |   |
L | K | E | E | H | L | Q | M |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|