Job Description P23836 Confidence 22.27% Date Thu Jan 5 11:39:41 GMT 2012 Rank 500 Aligned Residues 85 % Identity 11% Template d1lssa_ SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Potassium channel NAD-binding domain Resolution 2.30

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		M	R	V	L	V	V	E	D	N	A	L	L	R	H	H	L	K	V	Q	I	Q	D	A	G	H	Q	V	D	.	D	A	E	D	A	K	E	A	D	Y	Y	L	N	E	H	I	P	D	I	A	I	V	D	L	G	L	P	D	E	D	G	L	S	L	I	R	R	W	R	S	N	D	V	S	L	P	I	L	V	L	T
Query Conservation																														.
Alig confidence										.																				.																						.	.	.	.	.	.	.
Template Conservation										.																																										.	.	.	.	.	.	.
Template Sequence		M	Y	I	I	I	A	G	I	.	G	R	V	G	Y	T	L	A	K	S	L	S	E	K	G	H	D	I	V	L	I	D	I	D	K	D	I	C	K	K	A	S	A	E	I	D	A	L	V	I	N	.	.	.	.	.	.	.	G	D	C	T	K	I	K	T	L	E	D	A	G	I	E	D	A	D	M	Y	I	A	V
Template Known Secondary structure										.	S													T	T								S													S	S					.	.	.	.	.	.	.	S		T	T	S							T	T	T	T	T		S
Template Predicted Secondary structure										.																																										.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	S	W	Q	D	K	V	E	V	L	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	K	E	E	V	N	L	M	S	S	L	L	A
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions