 |
Job Description | P23836 | Confidence | 67.40% | Date | Thu Jan 5 11:39:41 GMT 2012 |
Rank | 237 | Aligned Residues | 87 |
% Identity | 17% | Template | d1geqa_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 2.00 |
|
 |
  |   |
32 | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | |
|
. | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
| . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
D | A | K | E | A | D | Y | Y | L | N | . |
. |
E | H | I | P | D | I | A | I | V | D | L | . |
. |
G | L | P | D | E | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | S | L | I | R | R | W | R | S | N | D | V | S | L | P | I | L | V | L | T | A | R | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |   | . | . |   |   |   |   |
|
|
|
|
|
|
| . | . |   |
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|   |   | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   | . |   |   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |
Template Sequence |   |
D | K | Q | S | T | L | N | F | L | L | A | L | D | E | Y | A | G | A | I | E | L | G | I | P | F | S | D | P | I | A | D | G | K | T | I | Q | E | S | H | Y | R | A | L | K | N | G | F | K | L | R | E | A | F | W | I | V | K | E | F | R | R | H | . |
S | S | T | P | I | V | L | M | T | Y | Y | N | P | I | Y | R | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | B | S |
|  |  |  |  |
|
|
| S |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | W | Q | D | K | V | E | V | L | S | A | G | A | D | D | Y | V | T | K | P | F | H | I | E | E | V | M | A | R | M | Q | A | L | M | R | R | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
G | V | R | N | F | L | A | E | A | K | A | S | G | V | D | G | I | L | V | V | D | L | P | V | F | H | A | K | E | F | T | E | I | A | R | E | E | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|