Return to main results Retrieve Phyre Job Id

Job DescriptionP23836
Confidence24.86%DateThu Jan 5 11:39:41 GMT 2012
Rank477Aligned Residues111
% Identity14%Templatec3s83A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ggdef family protein; PDBTitle: crystal structure of eal domain from caulobacter crescentus cb15
Resolution1.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60. ........70.........80.
Predicted Secondary structure 





















......









Query SS confidence 





















































. . . . . .



















Query Sequence  DNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLS. . . . . . LIRRWRSNDVSLPILVLTAR
Query Conservation 

      
   
   
  
  
    


        






 

   
  ......    

       

 

  
Alig confidence 



















.
































......



















Template Conservation           
  
   
  
. 



         
    



                
  
          


 

Template Sequence  RDPERAAVILKTLRDAGAGL. ALDDFFSSLSYLTRLPFDTLKIDRYFVRTXGNNAGSAKIVRSVVKLGQDLDLEVVAEGV
Template Known Secondary structure 
T
.


S



TTT
TT



Template Predicted Secondary structure 




.






















Template SS confidence 















































































   424.....430.........440... ......450.........460.........470.........480.........490.........500..
 
   82.......90....... ..100.........110.........
Predicted Secondary structure 






....














Query SS confidence 















. . . .





















Query Sequence  ESWQDKVEVLSAGADD. . . . YVTKPFHIEEVMARMQALMRRN
Query Conservation              

  ....

 

     
   
       
Alig confidence 















....





















Template Conservation 
       
   

   

     
    
    
       
Template Sequence  ENAEXAHALQSLGCDYGQGFGYAPALSPQEAEVYLNEAYVDG
Template Known Secondary structure 
ST


BTTTB

B
S
B

Template Predicted Secondary structure 


















Template SS confidence 









































   506...510.........520.........530.........540.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions