Job Description P23836 Confidence 96.04% Date Thu Jan 5 11:39:41 GMT 2012 Rank 151 Aligned Residues 170 % Identity 9% Template c3n75E_ PDB info PDB header:lyase Chain: E: PDB Molecule:lysine decarboxylase, inducible; PDBTitle: x-ray crystal structure of the escherichia coli inducible lysine2 decarboxylase ldci Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	L	L	R	H	H	L	K	V	Q	I	Q	D	A	G	H	Q	V	D	D	A	E	D	A	K	E	A	D	Y	Y	L	N	E	H	I	P	.	D	I	A	I	V	D	L	G	L	P	D	E	D	G	L	S	L	I	R	R	W	R	S	N	D	V	S	L	P	I	L	V	L	T	A	R	E	S	W	Q	D	K	V
Query Conservation																																						.
Alig confidence																																						.													.	.	.
Template Conservation																																																			.	.	.
Template Sequence		E	E	P	I	R	E	L	H	R	A	L	E	R	L	N	F	Q	I	V	Y	P	N	D	R	D	D	L	L	K	L	I	E	N	N	A	R	L	C	G	V	I	F	D	W	D	K	Y	N	L	.	.	.	E	L	C	E	E	I	S	K	M	N	E	N	L	P	L	Y	A	F	A	N	T	Y	S	T	L	D	V	S
Template Known Secondary structure															T	T							S	S												T	T														.	.	.											T	T									T	T					G	G
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																			.																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	L	S	A	G	A	D	D	Y	V	T	K	P	F	H	I	.	E	E	V	M	A	R	M	Q	A	L	M	R	R	N	S	G	L	.	.	.	A	S	Q	V	I	S	L	P	P	F	Q	V	D	L	S	R	R	E	L	S	I	N	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	D	L	R	L	Q	I	S	F	F	E	Y	A	L	G	A	A	E	D	I	A	N	K	I	K	Q	T	T	D	E	Y	I	N	T	I	L	P	P	L	T	K	A	L	F	K	Y	V	R	E	G	K	Y	T	F	C	T	P	G	H	M	G	G	T	A	F	Q	K	S	P	V	G	S	L	F	Y	D	F	F	G
Template Known Secondary structure		G	T	T	S											T	T																					S																		S		S	S	T	T	T	T	T					T	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
				147	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.								.
Query SS confidence		.	.								.
Query Sequence		.	.	V	I	K	L	T	A	F	.	E	Y	T	I	M	E	T	L	I	R	N	N	G	K	V	V	S	K	D	S	L	M	L	Q	L	Y	P	D	A
Query Conservation		.	.								.
Alig confidence		.	.								.
Template Conservation
Template Sequence		P	N	T	M	K	S	D	I	S	I	S	V	S	E	L	G	S	L	L	D	H	S	G	P	H	K	E	A	E	Q	Y	I	A	R	V	F	N	A	D
Template Known Secondary structure							T				T	T	S	G	G	G		B	T	T	T	T	B	T														T		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions