Return to main results Retrieve Phyre Job Id

Job DescriptionP23836
Confidence99.79%DateThu Jan 5 11:39:41 GMT 2012
Rank111Aligned Residues121
% Identity30%Templatec3lufB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50.........60.........70. .......
Predicted Secondary structure 









.














..




Query SS confidence 










































.


























. .






Query Sequence  RVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHI. PDIAIVDLGLPDEDGLSLIRRWRSNDV. . SLPILVL
Query Conservation 







      
   
   
  
  
    


       . 






 

   
      

    ..   

 
Alig confidence 










































.


























..






Template Conservation    
           
   
   
           

  
      
 

 
   
   
 
    

        


  
Template Sequence  EVLVVDDSRTSRHRTXAQLRKQLLQVHEASHAREALATLEQHPAIRLVLVDYYXPEIDGISLVRXLRERYSKQQLAIIGI
Template Known Secondary structure 
S
TTT
SS
TT

S

SSS


TTTS
Template Predicted Secondary structure 








































Template SS confidence 















































































   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   7980.........90.........100.........110.........120..
Predicted Secondary structure 



























Query SS confidence 











































Query Sequence  TARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGL
Query Conservation 
              

  

 

     
   
          
Alig confidence 











































Template Conservation 
           
 

  
 
 

     
   
   
      
Template Sequence  SVSDKRGLSARYLKQGANDFLNQPFEPEELQCRVSHNLEALEQF
Template Known Secondary structure 
STT
TT
SS


Template Predicted Secondary structure 













Template SS confidence 











































   204.....210.........220.........230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions