Job Description P23836 Confidence 53.46% Date Thu Jan 5 11:39:41 GMT 2012 Rank 296 Aligned Residues 104 % Identity 11% Template c3lkbB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:probable branched-chain amino acid abc PDBTitle: crystal structure of a branched chain amino acid abc2 transporter from thermus thermophilus with bound valine Resolution 2.40 Å

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		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure										.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		R	V	L	V	V	E	D	N	.	.	.	.	A	L	L	R	H	H	L	K	V	Q	I	Q	D	A	G	H	Q	V	D	D	A	E	.	.	.	.	.	.	.	D	A	K	E	A	D	Y	Y	L	N	E	H	I	P	D	I	A	I	V	D	L	G	L	P	D	E	D	G	L	S	L	I	R	R	W	R	S	N	D
Query Conservation										.	.	.	.																							.	.	.	.	.	.	.
Alig confidence										.	.	.	.																							.	.	.	.	.	.	.																			.	.
Template Conservation																																																													.	.
Template Sequence		K	V	A	L	V	V	H	P	S	P	F	G	R	A	P	V	E	D	A	R	K	A	A	R	E	L	G	L	Q	I	V	D	V	Q	E	V	G	S	G	N	L	D	N	T	A	L	L	K	R	F	E	Q	A	G	V	E	Y	V	V	.	.	H	Q	N	V	A	G	P	V	A	N	I	L	K	D	A	K	R	L	G
Template Known Secondary structure									S	S					T	T												T											T	T														T	T						.	.			S															T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	P	I	L	V	L	T	A	R	E	S	W	Q	D	K	V	E	V	L	S	A	G	A	D	D	Y	V	T	K	P	F	H	I	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	M	R	H	L	G	A	H	Y	T	G	G	P	D	L	I	A	L	A	G	D	A	A	E	G	F	L	W	A	T	S	F	Y	M	A	H
Template Known Secondary structure										G	G	G		S								G	G	G	G	T	T						S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions