Job Description P23836 Confidence 78.79% Date Thu Jan 5 11:39:41 GMT 2012 Rank 194 Aligned Residues 97 % Identity 11% Template c3i09A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic branched-chain amino acid-binding protein; PDBTitle: crystal structure of a periplasmic binding protein (bma2936) from2 burkholderia mallei at 1.80 a resolution Resolution 1.80 Å

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		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure										.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		R	V	L	V	V	E	D	N	.	.	.	.	A	L	L	R	H	H	L	K	V	Q	I	Q	D	A	G	H	Q	V	D	D	.	.	.	.	.	.	.	A	E	D	A	K	E	A	D	Y	Y	L	N	E	H	I	P	D	I	A	I	V	D	L	G	L	P	D	E	D	G	L	S	L	I	R	R	W	R	S	N	D
Query Conservation										.	.	.	.																					.	.	.	.	.	.	.
Alig confidence										.	.	.	.																					.	.	.	.	.	.	.																					.	.
Template Conservation																																																													.	.
Template Sequence		T	W	F	F	L	T	A	D	Y	A	F	G	K	A	L	E	K	N	T	A	D	V	V	K	A	N	G	G	K	V	L	G	E	V	R	H	P	L	S	A	S	D	F	S	S	F	L	L	Q	A	Q	S	S	K	A	Q	I	L	G	.	.	L	A	N	A	G	G	D	T	V	N	A	I	K	A	A	K	E	F	G
Template Known Secondary structure									S	S																	T	T											T	T		S												T			S				.	.																		T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	P	I	L	V	L	T	A	R	E	S	W	Q	D	K	V	E	V	L	S	A	G	A	D	D	Y	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	K	T	X	K	L	A	A	L	L	X	F	I	N	D	V	H	A	L	G	L	E	T	T	Q	G	L	V	L
Template Known Secondary structure		G	G	G	T						S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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