Job Description P23836 Confidence 99.69% Date Thu Jan 5 11:39:41 GMT 2012 Rank 117 Aligned Residues 97 % Identity 26% Template c2zxjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein walr; PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus Resolution 1.87 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	S	L	P	P	F	Q	V	D	L	S	R	R	E	L	S	I	N	D	E	V	I	K	L	T	A	F	E	Y	T	I	M	E	T	L	I	R	N	N	G	K	V	V	S	K	D	S	L	M	L	Q	L	Y	P	D	A	E	L	R	E	S	H	T	I	D	V	L	M	G	R	L	R	K	K	I	Q	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	I	T	I	K	D	I	V	I	Y	P	D	A	Y	S	I	K	K	R	G	E	D	I	E	L	T	H	R	E	F	E	L	F	H	Y	L	S	K	H	M	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	I	R	R	L	R	E	K	I	E	D	D
Template Known Secondary structure							T	T					G	G	G	T					T	T																		T	T	T	T													T		T	T			S		T																S	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		205	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		Y	P	Q	E	.	V	I	T	T	V	R	G	Q	G	Y	L	F	E
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		P	S	H	P	E	Y	I	V	T	R	R	G	V	G	Y	F	L	Q
Template Known Secondary structure		T	T	S		S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions