 |
Job Description | P23836 | Confidence | 36.45% | Date | Thu Jan 5 11:39:41 GMT 2012 |
Rank | 393 | Aligned Residues | 46 |
% Identity | 11% | Template | c2q1zA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:rpoe, ecf sige; |
PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr
|
Resolution | 2.40 Å |
|
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | T | A | F | E | Y | T | I | M | E | T | L | I | R | N | N | G | K | V | V | S | K | D | S | L | M | L | Q | L | Y | P | D | A | E | L | R | E | S | H | T | I | D | V | L | M | G | R | L | R | K | K | I | Q |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
| . | . | . |   |
|   |   |
|
|
|   |   |
| . | . | . | . | . |
|
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|
|
Template Sequence |   |
R | L | P | E | A | Q | R | A | L | I | E | R | A | F | F | G | D | . |
. |
. |
L | T | H | R | E | L | A | A | E | T | . |
. |
. |
. |
. |
G | L | P | L | G | T | I | K | S | R | I | R | L | A | L | D | R | L | R |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| . | . | . |
| S | S |
|
| S | T | T | T |
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
. | 150 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|