Job Description P23836 Confidence 67.77% Date Thu Jan 5 11:39:41 GMT 2012 Rank 236 Aligned Residues 95 % Identity 19% Template c2i2aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase 1; PDBTitle: crystal structure of lmnadk1 from listeria monocytogenes Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		M	R	V	L	V	V	E	D	N	.	.	.	.	A	L	L	R	H	H	L	K	V	Q	I	Q	D	A	G	H	Q	V	D	D	A	E	D	A	K	E	A	D	Y	Y	L	N	E	H	I	P	D	I	A	I	V	D	L	G	L	P	D	E	D	G	L	S	L	I	R	R	W	R	S	N	D	V	S	L	P	I	L
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		M	K	Y	M	I	T	S	K	G	D	E	K	S	D	L	L	R	L	N	M	I	A	G	F	G	E	Y	D	M	E	Y	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	P	E	I	V	I	.	.	S	I	G	G	D	G	T	F	L	S	A	F	H	Q	Y	E	E	R	L	D	E	I	A	F	I
Template Known Secondary structure											S															T	T	S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S				.	.				S											T	T	T	S	G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.														.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	T	A	R	E	S	W	Q	D	K	V	E	V	L	S	A	G	A	D	D	Y	V	T	K	P	F	H	I	E	E	V	M	A	R	M	Q	A	L	M	R	R	N	S	G	L	A	S
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		G	I	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	L	G	F	Y	A	.	D	W	R	P	A	E	A	D	K	L	V	K	L	L	A	K	G	E	Y	Q	K	V	S
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S	S		.				G	G	G											T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		66	.	.	.														70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions