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Job DescriptionP0AET8
Confidence100.00%DateThu Jan 5 11:24:13 GMT 2012
Rank3Aligned Residues247
% Identity30%Templatec3uf0A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK
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Template Sequence  PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT. DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT
Template Known Secondary structure  TT

TT
TTTSTT
SS.TTTT


TT
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   4.....10.........20.........30.........40.. .......50.........60.........70.........80..
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA
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Template Sequence  RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHA
Template Known Secondary structure  S











GGG

TT


GGGTS

SS
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   166...170.........180.........190.........200 .........210.........220.........230.........240....
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Query Sequence  ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV. ITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL
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Template Sequence  VVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVL
Template Known Secondary structure  GGGT
SB
SGGGTSSTTSS
B
GGGGSGGGTT

S
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   245....250...
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Query Sequence  TVSGGGVQE
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Template Sequence  AVDGGWLAS
Template Known Secondary structure  STTGGG
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   243......250.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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