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Job DescriptionP0AET8
Confidence100.00%DateThu Jan 5 11:24:13 GMT 2012
Rank89Aligned Residues244
% Identity23%Templatec3rkuC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:oxidoreductase ymr226c; PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30..... ....40.........50........ .60.........70.........80..
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Query Sequence  RLDGKCAIITGAGAGIGKEIAITFATAG. . . ASVVVSDINADAANHVVDEIQQL. . GGQAFACRCDITSEQELSALADFA
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Template Sequence  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL
Template Known Secondary structure  TT
STTSTTTT

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TT
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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   83......90.........100. ........110.........120.........130.........140.........150.........160
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Query Sequence  ISKLGKVDILVNNAGGGGP. . KPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
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Template Sequence  PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC
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TT


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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS
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Template Sequence  ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGN. EEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVI
Template Known Secondary structure  TTTSSS
SSTTT
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   170.........180.........190.........200.........210... ......220.........230.........240........
 
   241........250..
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Query Sequence  GQILTVSGGGVQ
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Template Sequence  ADTLIFPTNQAS
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TT
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   249250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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