Return to main results Retrieve Phyre Job Id

Job DescriptionP0AET8
Confidence98.46%DateThu Jan 5 11:24:13 GMT 2012
Rank264Aligned Residues195
% Identity8%Templatec3r6dA_
PDB info PDB header:lyase, isomeraseChain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILV
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Template Sequence  ITILGAAGQIAQLTATLLTYTDXHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGLEQAVTNAEVVFVGAXESGS. . .
Template Known Secondary structure  STTSTTT





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   5....10.........20.........30.........40.........50.........60.........70.........80.
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  NNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DXASIVKALSRNIRRVIGVSXAGLSGEFPVALEKWTFDNLPISYVQGE
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   84.....90.........100.........110.........120.........130.
 
   174.. ...180.........190.........200.........210.........220.........230.... .....240........
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Query Sequence  AFD. . . LGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP. AASWVSGQILTVSG
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Template Sequence  RQARNVLRESNLNYTILRLTWLYNDPETDYELI. . . . . PEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGE
Template Known Secondary structure  S
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   133......140.........150.........160..... ....170.........180.........190.........200......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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