Return to main results Retrieve Phyre Job Id

Job DescriptionP0AET8
Confidence98.76%DateThu Jan 5 11:24:13 GMT 2012
Rank241Aligned Residues181
% Identity14%Templatec3lu1C_
PDB info PDB header:isomeraseChain: C: PDB Molecule:wbgu; PDBTitle: crystal structure analysis of wbgu: a udp-galnac 4-epimerase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK
Query Conservation 
 









 


 


  
   

 
    
                        
                    
Alig confidence 















































































Template Conservation     
 










  

  

  
  
    
                                             
Template Sequence  FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD
Template Known Secondary structure  S

TTTSTT

SSS

S
TT

TT
TTTT
S
Template Predicted Secondary structure 

































Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   8990.........100.........110.........120.........130.........140.... .....150.........160......
Predicted Secondary structure 

















































..









Query SS confidence 























































. .





















Query Sequence  VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI. . TSMAAENKNINMTSYASSKAAA
Query Conservation                                                          .. 
            
  

   
Alig confidence 























































..





















Template Conservation       
                                                                  
   
   
Template Sequence  HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN
Template Known Secondary structure 






TT
SGGGGTT


SSB
TT





S
Template Predicted Secondary structure 


























































Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   167..170.........180.........
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  SHLVRNMAFDLGEKNIRVNGIAP
Query Conservation         
 
     
 

 
 
Alig confidence 






















Template Conservation                    
    
Template Sequence  EIYAQVYARTYGFKTIGLRYFNV
Template Known Secondary structure 




S
Template Predicted Secondary structure 




Template SS confidence 






















   174.....180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions