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Job DescriptionP0AET8
Confidence100.00%DateThu Jan 5 11:24:13 GMT 2012
Rank27Aligned Residues240
% Identity33%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK
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Template Sequence  DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE
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TTTT
S
SSTT
SST




TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   86...90.........100.... .....110.........120.........130.........140.........150.........160....
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Query Sequence  LGKVDILVNNAGGGGPKPF. DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA
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Template Sequence  FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKA
Template Known Secondary structure  S











GGG

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T

TT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL
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Template Sequence  GVAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTL
Template Known Secondary structure  GGGT

SB




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TT
S
B
SGGGTT

S
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   162.......170.........180.........190..... ....200.........210.........220.........230...
 
   245....250...
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Query Sequence  TVSGGGVQE
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Template Sequence  HVNGGMFMS
Template Known Secondary structure  STTSS

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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