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Job DescriptionP0AET8
Confidence100.00%DateThu Jan 5 11:24:13 GMT 2012
Rank73Aligned Residues251
% Identity31%Templatec2wdzD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of the short chain dehydrogenase2 galactitol-dehydrogenase (gatdh) of rhodobacter3 sphaeroides in complex with nad+ and 1,2-pentandiol
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD
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Template Sequence  MDYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEA
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TTTTT

TT
TTTSTT
S
GGG

TT
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Query Sequence  FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
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Template Sequence  EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYM
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B
GGG

TTT


GGGTS

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B
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Query Sequence  SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT. PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWV
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Template Sequence  ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYV
Template Known Secondary structure  TTT

BSSGGGTST
TT
S
B
SGGGTT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   240.........250.
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Query Sequence  SGQILTVSGGGV
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Template Sequence  TGAILAVDGGYT
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STTGG
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   241........250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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