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Job DescriptionP0AET8
Confidence100.00%DateThu Jan 5 11:24:13 GMT 2012
Rank34Aligned Residues244
% Identity33%Templatec2p68A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of aq_1716 from aquifex aeolicus vf5
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60. ........70.........80....
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Query Sequence  NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ. AFACRCDITSEQELSALADFAIS
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Template Sequence  EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN
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TT
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TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   85....90.........100.... .....110.........120.........130.........140.........150.........160...
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Query Sequence  KLGKVDILVNNAGGGGPKPF. DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK
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Template Sequence  LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK
Template Known Secondary structure  SS

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GGG

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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQI
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Template Sequence  AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT. AVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEV
Template Known Secondary structure  GGGT
SB

GGG.GGS
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B
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   162.......170.........180.........190..... ....200.........210.........220.........230.........240
 
   244.....250
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Query Sequence  LTVSGGG
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Template Sequence  IHVNGGM
Template Known Secondary structure  STT
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   241......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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