Return to main results Retrieve Phyre Job Id

Job DescriptionP0AET8
Confidence99.46%DateThu Jan 5 11:24:13 GMT 2012
Rank208Aligned Residues220
% Identity11%Templatec2gn9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.... .....40.........50.........60.........70.........80......
Predicted Secondary structure 








..





























Query SS confidence 

























. .



















































Query Sequence  LDGKCAIITGAGAGIGKEIAITFATA. . GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL
Query Conservation 
 









 


 


  
   ..

 
    
                        
                  
Alig confidence 

























..






















..


























Template Conservation     
 







 


 

  
     
  
    
              ..     
  

 
               
Template Sequence  LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND. . PRMRFFIGDVRDLERLNYALEGVDICI
Template Known Secondary structure 
BS
TTTSSB
SS
S

..TT

TT
TTT
S
Template Predicted Secondary structure 





















..
















Template SS confidence 















































































   8.10.........20.........30.........40.........50........ .60.........70.........80.....
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 





























































Query SS confidence 















































































Query Sequence  GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAA
Query Conservation                                                             
            
  

   
Alig confidence 








..............
























































Template Conservation    

     ..............                
  
  
         
  

                    
Template Sequence  HAAALKHVP. . . . . . . . . . . . . . IAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKL
Template Known Secondary structure 





..............STT
S

GGGSS

S
Template Predicted Secondary structure 




..............


















Template SS confidence 















































































   86...90.... .....100.........110.........120.........130.........140.........150.
 
   167..170.........180.........190.........200.........210.........220. ........230.......
Predicted Secondary structure 




























.........

Query SS confidence 






















































. . . . . . . . .















Query Sequence  SHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQP. . . . . . . . . QDIANAALFLCSPAAS
Query Conservation         
 
     
 

 
 

 
 
                   
  
   
.........



  
 

 
  
 
Alig confidence 
...
























..























.........














.
Template Conservation   ...               


   


 ..                       
   
  
 
 
 
 
   
     .
Template Sequence  F. . . VSANNFKGSSQTQFSVVRYGNVVGS. . RGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH.
Template Known Secondary structure  ...GGG

SSS




SS
..TT
STTT

S



S
SS



.
Template Predicted Secondary structure  ...





..














.
Template SS confidence 















































































   152 .......160.........170....... ..180.........190.........200.........210.........220.....
 
   238.240.........250..
Predicted Secondary structure 








Query SS confidence 














Query Sequence  WVSGQILTVSGGGVQ
Query Conservation   


  
 



   
Alig confidence  ..












Template Conservation  ..            
Template Sequence  . . GGEIFVPKIPSMK
Template Known Secondary structure  ..SS



Template Predicted Secondary structure  ..






Template SS confidence 














   226...230........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions