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Job DescriptionP0AET8
Confidence100.00%DateThu Jan 5 11:24:13 GMT 2012
Rank105Aligned Residues236
% Identity30%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK
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Template Sequence  FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH. . . . . . . . . . . DPGEAKYDHIECDVTNPDQVKASIDHIFKE
Template Known Secondary structure 
GGGTT
T
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S
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TT
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   2.......10.........20.........30.........40 .........50.........60.........70
 
   86...90.........100.... .....110.........120.........130.........140.........150.........160....
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Query Sequence  LGKVDILVNNAGGGGPKPF. DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA
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Template Sequence  YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH
Template Known Secondary structure  S









B
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   165....170.........180.........190.........200.. .......210.........220.........230....
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Query Sequence  AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT. . . . . . . . . . PEIEQKMLQHTPIRRLGQPQDIANAALFLCSP
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Template Sequence  AVIGLTKSIALDYAPL. LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR
Template Known Secondary structure  TTT.S
SBSS
S
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   151........160...... ...170.........180.........190.........200.........210.........220.........
 
   235....240.........250...
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Query Sequence  AASWVSGQILTVSGGGVQE
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Template Sequence  EASFITGTCLYVDGGLSIR
Template Known Secondary structure  GGTT

S
STTGGG
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   230.........240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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