 |
Job Description | P69407 | Confidence | 59.24% | Date | Thu Jan 5 12:11:30 GMT 2012 |
Rank | 479 | Aligned Residues | 56 |
% Identity | 11% | Template | d1y9qa1 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| Probable transcriptional regulator VC1968, N-terminal domain
|
Resolution | 1.90 |
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | E | V | L | R | L | F | A | E | G | F | L | V | T | E | I | A | K | K | L | N | R | S | I | K | T | I | S | S | Q | K | K | S | A | M | M | K | L | G | V | E | N | D | I | A | L | L | N | Y | L | S | S | V | T | L | S | P | A | D |
Query Conservation |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|
|
| . | . | . | . |   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |
Template Sequence |   |
N | Q | L | K | N | L | R | K | S | R | G | L | S | L | D | A | T | A | Q | L | T | G | V | S | . |
. |
. |
. |
K | A | X | L | G | Q | I | E | R | G | E | S | S | P | T | I | A | T | L | W | K | I | A | S | G | L | E | A | S | F | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | S | S |
| . | . | . | . |  |  |  |  |  |  |  |  | T | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|