Job Description P69407 Confidence 99.35% Date Thu Jan 5 12:11:30 GMT 2012 Rank 33 Aligned Residues 117 % Identity 16% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	N	M	N	V	I	I	A	D	D	H	P	I	V	L	F	G	I	R	K	S	L	E	Q	I	E	W	V	N	V	V	G	E	F	E	D	S	T	A	L	I	N	N	L	P	K	L	D	A	H	V	L	I	T	D	L	S	M	P	G	D	K	Y	G	D	G	I	T	L	I	K	Y	I	K	R	H	F	P	S
Query Conservation
Alig confidence				.	.																																																																									.	.	.
Template Conservation				.	.																																																																									.	.	.
Template Sequence		L	T	.	.	S	L	I	I	A	E	D	Q	N	M	L	R	Q	A	M	V	Q	L	I	K	L	H	G	D	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	N	P	N	V	V	I	L	D	I	E	M	P	G	M	T	G	L	E	V	L	A	E	I	R	K	K	H	L	.	.	.	N
Template Known Secondary structure				.	.							S																S	S								S															S						S	S		S	S	S												T	T		.	.	.	S
Template Predicted Secondary structure				.	.																																																																									.	.	.
Template SS confidence
		3	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	I	V	L	T	M	N	N	N	P	A	I	L	S	A	V	L	D	L	D	I	E	G	I	V	L	K	Q	G	A	P	T	D	L	P	K	A	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	V	I	I	V	T	T	F	K	R	P	G	Y	F	E	K	A	V	V	N	D	V	D	A	Y	V	L	K	E	R	S	I	E	E	L	V	E	T	I	N	K
Template Known Secondary structure									S													T	T		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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