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Job Description | P0AC51 | Confidence | 65.59% | Date | Thu Jan 5 11:17:11 GMT 2012 |
Rank | 252 | Aligned Residues | 84 |
% Identity | 17% | Template | d1ldja1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| SCF ubiquitin ligase complex WHB domain
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Resolution | 3.00 |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | E | K | T | T | T | Q | E | L | L | A | Q | A | E | K | I | C | A | Q | R | N | V | R | L | T | P | Q | R | L | E | V | L | R | L | M | S | L | Q | D | G | A | I | S | A | Y | D | L | L | D | L | L | R | E | A | E | P | Q | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | K | T | E | Q | K | Q | E | Q | E | T | T | H | K | N | I | E | E | D | . |
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R | K | L | L | I | Q | A | A | I | V | R | I | M | K | M | R | K | . |
V | L | K | H | Q | Q | L | L | G | E | V | L | T | Q | L | S | S | R | F | K | P | R | V | P | V | I | K | K | C | I | D | I | L | I | E | K | E | Y | L | E |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
688 | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | |
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. | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | |
. | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . |
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78 | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | V | E | S | T | N | S | Y | V | L | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | V | D | G | E | K | D | T | Y | S | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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764 | . | . | . | . | . | 770 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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