Job Description P0AC51 Confidence 97.95% Date Thu Jan 5 11:17:11 GMT 2012 Rank 9 Aligned Residues 85 % Identity 16% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	T	T	Q	E	L	L	A	Q	A	E	K	I	C	A	Q	R	N	V	R	L	T	P	Q	R	L	E	V	L	R	L	M	S	L	Q	D	G	A	I	S	A	Y	D	L	L	D	L	L	R	E	A	E	P	Q	A	K	P	P	T	V	Y	R	A	L	D	F	L	L	E	Q	G	F	V	H	K	V	E	S
Query Conservation
Alig confidence																													.	.																						.	.	.	.	.
Template Conservation																													.	.																						.	.	.	.	.
Template Sequence		X	E	E	A	K	K	L	I	I	E	L	F	S	E	L	A	K	I	H	G	L	N	K	S	V	G	A	.	.	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	.	.	.	.	.	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	G	F	V	R	K	V	W	I
Template Known Secondary structure																				T	T								.	.									S	S												.	.	.	.	.	T																T	T	S
Template Predicted Secondary structure																													.	.																						.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	S	Y	V	L	C	H	L	F	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	E	R	K	N	Y	Y	E	A	V	D
Template Known Secondary structure		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions