 |
Job Description | P0AC51 | Confidence | 75.07% | Date | Thu Jan 5 11:17:11 GMT 2012 |
Rank | 230 | Aligned Residues | 51 |
% Identity | 20% | Template | c3q9vB_ |
PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:dna-binding response regulator; |
PDBTitle: crystal structure of rra c-terminal domain(123-221) from deinococcus2 radiodurans
|
Resolution | 1.60 Å |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | L | T | P | Q | R | L | E | V | L | R | L | M | S | L | Q | D | G | . |
A | I | S | A | Y | D | L | L | D | L | L | R | E | A | E | P | Q | A | K | P | P | T | V | Y | R | A | L | D | F | L | L | E |
Query Conservation |   |
|
|   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   | . |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
Template Sequence |   |
L | R | L | S | P | K | E | F | D | I | L | A | L | L | I | R | Q | P | G | R | V | Y | S | R | Q | E | I | G | Q | E | I | W | Q | G | R | L | P | E | G | S | N | V | V | D | V | H | M | A | N | L | R | A |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|