Job Description P0AC51 Confidence 27.75% Date Thu Jan 5 11:17:11 GMT 2012 Rank 442 Aligned Residues 34 % Identity 18% Template c3mkyP_ PDB info PDB header:dna binding protein/dna Chain: P: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form Resolution 2.86 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	M	S	L	Q	D	G	A	I	S	A	Y	D	L	L	D	L	L	R	E	A	E	P	Q	A	K	P	P	T	V	Y	R	A	L	D	F	L
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		Y	A	S	R	L	Q	N	E	F	A	G	N	I	S	A	L	A	D	A	E	.	.	.	.	.	N	I	S	R	K	I	I	T	R	C	I	N	T	A
Template Known Secondary structure								T	T	T	T	T										.	.	.	.	.	T	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions