Job Description P0AC51 Confidence 30.36% Date Thu Jan 5 11:17:11 GMT 2012 Rank 412 Aligned Residues 71 % Identity 14% Template c3lukB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:protein argonaute-2; PDBTitle: crystal structure of mid domain from hago2 Resolution 1.70 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.
Query Sequence		M	E	K	T	T	T	Q	E	L	L	A	Q	A	E	K	I	C	A	Q	R	N	V	R	L	T	P	Q	R	L	E	V	L	R	L	M	S	L	Q	D	G	A	I	S	A	Y	D	L	L	D	L	L	R	E	A	E	P	Q	A	.	.	.	.	.	.	.	.	K	P	P	T	V	Y	R	A	L	D	F	L	L	E
Query Conservation																																																												.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		C	T	E	V	H	L	K	S	F	T	E	Q	L	R	K	I	S	R	D	A	G	X	P	I	Q	G	Q	P	C	.	.	.	.	F	C	K	Y	A	Q	G	A	D	S	V	E	P	X	F	R	H	L	K	N	T	Y	A	G	L	Q	L	V	V	V	I	L	P	G	K	T	P	V	Y	A	E	V	K	R	V	G	D
Template Known Secondary structure		S																			T	T			B		S	S		S	.	.	.	.							S	G	G	G													T	T										S	S
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490					.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		73	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	L
Template Known Secondary structure			T	S
Template Predicted Secondary structure
Template SS confidence
		538	.	540

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions