Job Description P0AC51 Confidence 97.07% Date Thu Jan 5 11:17:11 GMT 2012 Rank 29 Aligned Residues 78 % Identity 18% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	T	T	T	Q	E	L	L	A	Q	A	E	K	I	C	A	Q	R	N	V	R	L	T	P	Q	R	L	E	V	L	R	L	M	S	L	Q	D	G	A	I	S	A	Y	D	L	L	D	L	L	R	E	A	E	P	Q	A	K	P	P	T	V	Y	R	A	L	D	F	L	L	E	Q	G	F	V	H	K	V	E
Query Conservation
Alig confidence																							.	.	.														.	.													.	.	.	.	.
Template Conservation																							.	.	.														.	.													.	.	.	.	.
Template Sequence		M	N	L	K	D	X	E	Q	N	S	A	K	A	V	V	L	L	K	A	X	A	.	.	.	N	E	R	R	L	Q	I	L	C	X	L	H	N	.	.	Q	E	L	S	V	G	E	L	C	A	K	L	.	.	.	.	.	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K
Template Known Secondary structure																							.	.	.	S										T	T	T	.	.	S												.	.	.	.	.	T																T	T	S
Template Predicted Secondary structure																							.	.	.														.	.													.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		81	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	N	S	Y	V	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	Q	T	V	Y	Y	T
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions