Job Description P0AC51 Confidence 46.59% Date Thu Jan 5 11:17:11 GMT 2012 Rank 304 Aligned Residues 58 % Identity 16% Template c3cuqA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	L	R	L	M	S	L	Q	D	G	A	I	S	A	Y	D	L	L	D	L	L	R	E	A	E	P	Q	A	K	P	P	T	V	Y	R	A	L	D	F	L	L	E	Q	G	F	V	H	K	V	E	S	T	N	S	Y	V	L	C	H	L	F	D
Query Conservation
Alig confidence							.																		.	.	.	.	.
Template Conservation							.																		.	.	.	.	.
Template Sequence		T	V	V	L	Q	.	L	A	E	K	N	G	Y	V	T	V	S	E	I	K	A	S	L	.	.	.	.	.	K	W	E	T	E	R	A	R	Q	V	L	E	H	L	L	K	E	G	L	A	W	L	D	L	Q	A	P	G	E	A	H	Y	W	L	P	A
Template Known Secondary structure							.			T	T	T	S												.	.	.	.	.	T																	T	S					S	S	S	S	S	S						T	T
Template Predicted Secondary structure							.																		.	.	.	.	.
Template SS confidence
		181	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions