Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC51
Confidence28.24%DateThu Jan 5 11:17:11 GMT 2012
Rank436Aligned Residues48
% Identity8%Templatec2xzm8_
PDB info PDB header:ribosomeChain: 8: PDB Molecule:rps25e,; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90....
Predicted Secondary structure 


















Query SS confidence 




















































Query Sequence  ISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQP
Query Conservation   

 

   
      

 




 
  
 
 


  
        
      
Alig confidence 









.....





































Template Conservation 



 




.....

  




 

 
   



 

  

  


     
Template Sequence  LTVSTVVEKL. . . . . KVNGSLARQLMRTMADRKLVEKVAKNGNQWVYSVIGGV
Template Known Secondary structure 
.....
B
TTSTTTT

Template Predicted Secondary structure 
.....










Template SS confidence 




















































   64.....70... ......80.........90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions