Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC51
Confidence99.97%DateThu Jan 5 11:17:11 GMT 2012
Rank5Aligned Residues129
% Identity23%Templatec2w57A_
PDB info PDB header:metal transportChain: A: PDB Molecule:ferric uptake regulation protein; PDBTitle: crystal structure of the vibrio cholerae ferric uptake2 regulator (fur) reveals structural rearrangement of the3 dna-binding domains
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40 .........50.........60.........70.........80.........90.
Predicted Secondary structure 








.
















Query SS confidence 



























.


















































Query Sequence  AEKICAQRNVRLTPQRLEVLRLMSLQDG. AISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLF
Query Conservation      
   


 
  
  

  
     .
 

 

   
      

 




 
  
 
 


  
        
   
Alig confidence 



























.


















































Template Conservation      

  


 
  
  

  
      
 

 

   
      

 




 
  
   


           
   
Template Sequence  NNQALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELS
Template Known Secondary structure  TT



TSGGGSSTT



TTS
GGG

Template Predicted Secondary structure 


























Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   92.......100.........110.........120.........130.........140...
Predicted Secondary structure 


















Query SS confidence 



















































Query Sequence  DQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLC
Query Conservation      
 
 
 

  



       
      
    

 
    
 
 


Alig confidence 
..
















































Template Conservation   ..  

 
  
  

 
       
           

 
        


Template Sequence  T. . QHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTNHSLYLYGKC
Template Known Secondary structure 
..SS

TTT



TT









Template Predicted Secondary structure 
..














Template SS confidence 



















































   84 .....90.........100.........110.........120.........130...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions