Job Description P0AC51 Confidence 39.95% Date Thu Jan 5 11:17:11 GMT 2012 Rank 343 Aligned Residues 41 % Identity 15% Template c1pb6D_ PDB info PDB header:transcription Chain: D: PDB Molecule:hypothetical transcriptional regulator ycdc; PDBTitle: crystal structure of hypothetical transcriptional regulator ycdc Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	T	T	Q	E	L	L	A	Q	A	E	K	I	C	A	Q	R	N	V	R	L	T	P	Q	R	L	E	V	L	R	L	M	S	L	Q	D	G	A	I	S	A	Y	D	L	L	D	L	L	R	E	A	E	P	Q	A	K	P	P	T	V	Y	R
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	E	Q	I	A	E	L	A	.	.	.	.	.	G	V	S	K	T	N	L	L	Y
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																		.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions