Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG86
Confidence100.00%DateThu Jan 5 11:28:26 GMT 2012
Rank3Aligned Residues133
% Identity100%Templated1qyna_
SCOP infoSecB-like SecB-like Bacterial protein-export protein SecB
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGI
Query Conservation     
   







 



  
     
 
   
        
   

 
 
 
 
       
  

   


 
  
Alig confidence 















































































Template Conservation   
 
   







 



  
     
 
 
 
   
  
 
   

 
 
 
 
       
  

   


 
   
Template Sequence  TFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGI
Template Known Secondary structure 
TTTTS



TTTTS
Template Predicted Secondary structure 






























Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   90.........100.........110.........120.........130.........140..
Predicted Secondary structure 
















Query SS confidence 




















































Query Sequence  EGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQ
Query Conservation    
     
 
 

 




 




 

  





 
 



  

     
Alig confidence 




















































Template Conservation    
     
 
 

 




 
  

  
   




 
  


  

    
Template Sequence  EGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQ
Template Known Secondary structure 
TT










Template Predicted Secondary structure 















Template SS confidence 




















































   90.........100.........110.........120.........130.........140..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions