Job Description P0AG86 Confidence 19.14% Date Thu Jan 5 11:28:26 GMT 2012 Rank 76 Aligned Residues 56 % Identity 11% Template c2fikB_ PDB info PDB header:immune system Chain: B: PDB Molecule:b(2)-microglobulin; PDBTitle: structure of a microbial glycosphingolipid bound to mouse cd1d Resolution 1.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	A	P	H	V	F	Q	K	D	W	Q	P	E	V	K	L	D	L	D	T	A	S	S	Q	L	A	D	D	V	Y	E	V	V	L	R	V	T	V	T	A	S	L	G	E	E	T	A	F	L	C	E	V	Q	Q	G	G	I
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		P	P	H	I	E	I	Q	M	L	K	N	G	K	K	I	P	K	V	E	M	S	D	M	S	F	S	K	D	W	S	F	Y	I	L	A	H	T	E	F	T	P	T	E	T	D	.	.	T	Y	A	C	R	V	K	H	A	S	M
Template Known Secondary structure		S	S									T	T				S											T	T	S														S	S		.	.									T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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