Return to main results Retrieve Phyre Job Id

Job DescriptionP45463
Confidence99.76%DateThu Jan 5 12:02:41 GMT 2012
Rank19Aligned Residues205
% Identity10%Templated1utha_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130 .........140.........150.........160.........
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Query Sequence  TRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQVHFE. . LFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRIL
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Template Sequence  FASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFFQRRLFRHRYV
Template Known Secondary structure  TT





TT

TTSS
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TT

TT
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  CAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSEWDV
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Template Sequence  CMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGE. . VDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFA
Template Known Secondary structure  TT
SS

SS

S

TTSGGGG..TT


SSSTTTSS
B
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   173......180.........190.........200........ .210.........220.........230.........240.........250
 
   250.........260. ........270.........280.........290........
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Query Sequence  LPFLESGKLVQV. LPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQ
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Template Sequence  VRCEVPFGLTTSPHPAKLPDIAINLFWHAKYNRDPGNMWLRQLFVELFSE
Template Known Secondary structure  TTTTT
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GGGTT


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   251........260.........270.........280.........290.........300
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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