Return to main results Retrieve Phyre Job Id

Job DescriptionP45463
Confidence86.28%DateThu Jan 5 12:02:41 GMT 2012
Rank202Aligned Residues43
% Identity19%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.. .......40.........50.........60....
Predicted Secondary structure 


.







Query SS confidence 










.































Query Sequence  SFSAAAATLGQ. TPAFVTKRIQILENTLATTLLNRSARGVALTE
Query Conservation 
 
 

  
 
.





  
  

  

  

 
      

 
Alig confidence 










.































Template Conservation 




    
  
  

  

  

 

 
 
     
 
 
  
Template Sequence  TRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQ
Template Known Secondary structure 
TT
SSTTS
SSSSS


Template Predicted Secondary structure 
















Template SS confidence 











































   27..30.........40.........50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions