Job Description P45463 Confidence 97.31% Date Thu Jan 5 12:02:41 GMT 2012 Rank 64 Aligned Residues 75 % Identity 15% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																				.	.	.	.	.
Query SS confidence																	.	.	.	.																																				.	.	.	.	.
Query Sequence		L	A	K	D	L	Q	V	L	V	E	I	V	H	S	G	.	.	.	.	S	F	S	A	A	A	A	T	L	G	Q	T	P	A	F	V	T	K	R	I	Q	I	L	E	N	T	L	A	T	T	L	L	N	R	S	.	.	.	.	.	A	R	G	V	A	L	T	E	S	G	Q	R	C	Y	E	H	A	L	E	I	L
Query Conservation																	.	.	.	.																																				.	.	.	.	.
Alig confidence																	.	.	.	.																										.										.	.	.	.	.
Template Conservation																																														.
Template Sequence		T	S	R	Q	Y	X	T	I	L	S	I	L	H	L	P	E	E	E	T	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N	I	N	R	L	V	A	N	L	E	K	.	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	T	D	L	G	K	K	V	X	V	T	C	S	R	T	G
Template Known Secondary structure														T	S		G	G	G											T	S															.	T	T	S							S	S		T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		78	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Y	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	F	X	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions